Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX449850: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-306139' containing sample 'Staphylococcus aureus W50092'
1 ILLUMINA (Illumina HiSeq 2000) run: 2.2M spots, 439.8M bases, 226Mb downloads

UUID: 1f414e99-187d-45a2-b41b-0a9e6f4fbc80

Design: Illumina sequencing of Staphylococcus aureus W50092 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA225228 • SRP035740 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus W50092

SAMN02385550 • SRS543482 • All experiments • All runs

Organism: Staphylococcus aureus W50092

Library:

Name: Pond-306139

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 444660.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:56RUG

material_type: DNA:DNA Somatic

product_order: PDO-2382

product_part_number: P-WG-0004

project: G51421

research_project: RP-509

root_sample_id: SM-4T4E5

sample_id: SM-56RUG

work_request: 39025

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-13 20:46:09.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 2.2M spots, 439.8M bases, 226Mb

Run	# of Spots	# of Bases	Size	Published
SRR1144603	2,176,990	439.8M	226Mb	2014-01-24

ID:: 628798

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